YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YDL172C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFQLNIVFK ELKNPDFFFF FFFFSLPLSS FKLNLSSSSS FKLWLIVFLL DFGEIMFPAP  60
   61 PLPIANFSGA LLPLSLFLGF LDVDLIAAKA LPLEVTTNRL SSFALIVSSS SILPPRISSS 120
  121 SFPPLLATFF LLKKMFPAPP LPTTIGALLF GDEVVACKD

Type	Start	End	Confidence
Cytoplasmic	1	16	0.54
Transmembrane Helix	17	36	0.86
Non-Cytoplasmic	37	61	0.45
Transmembrane Helix	62	86	0.75
Cytoplasmic	87	99	0.66
Transmembrane Helix	100	117	0.63
Non-Cytoplasmic	118	159	0.60