YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YDL144C
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKMSRILVI GAGGVGVITA LSLWLKKESD VSLVVRSDYD RVLKHGYTIE SCDYGRLEGW  60
   61 RPHHIYSSVE DAASAADNQG YNYIVVTTKN IIDGPVNSRV SNIIRPVLEK NKELHGPQLT 120
  121 THILLVQNGI DIEKEIWAEF PREQYRYTVL SGIQLIGSTK IGSGHISQVG QDHLSCGAFD 180
  181 PQDAAAIQAA NDFVRMYSNE GQNFVEFDPR VRYSRWKKLL YNAAINTSTA LVGLDVPRCL 240
  241 EFGVNKKSTE IEVFHPAMRE IIAIAASEGI IIEEEFITMF TEITRKKVFK PSMCVDCEKG 300
  301 QLMELEVILG NPIRIAKRNG VATPTLSILY NLLVLVQAKL KERKGLLKFD EKTATLVDE

Type	Start	End	Confidence
Signal Peptide	1	22	0.53
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	359	0.98