YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CRD1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQMVPIYSC SALLRRTIPK RPFYHVLSGL TVRFKVNPQL NYNLFRDLTR REYATNPSKT  60
   61 PHIKSKLLNI PNILTLSRIG CTPFIGLFII TNNLTPALGL FAFSSITDFM DGYIARKYGL 120
  121 KTIAGTILDP LADKLLMITT TLALSVPSGP QIIPVSIAAI ILGRDVLLAI SALFIRYSTL 180
  181 KLKYPGRVAW NSYWDIVRYP SAEVRPSQLS KWNTFFQMVY LGSGVLLLLY EKEEGCEKTE 240
  241 EDFEDRKQDF QKAFSYLGYV TATTTIMSGV SYALKRNAFK LLK

Type	Start	End	Confidence
Cytoplasmic	1	78	0.91
Transmembrane Helix	79	103	0.74
Non-Cytoplasmic	104	151	0.76
Transmembrane Helix	152	175	0.79
Cytoplasmic	176	283	0.71