YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YDL133W
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDSNSSQEA YSDTTSTNAS RIADQNQLNL NVDLEKNQTV RKSGSLEALQ NAKIHVPKHS  60
   61 DGSPLDYPKL NTYTFVPTTV PPYVLEAQFD KLRLQDKGTV DGNVTDDKNL PKEFKWGQFA 120
  121 STIGCHSAYT RDQNYNPSHK SYDGYSLSSS TSSKNAALRE ILGDMCSEWG GEERLEGVLH 180
  181 SEIGANLEFN TTEERKEWLQ YIEKVKDFYY GDNKKNPESP ESVHNKVYKS DWVNELNKER 240
  241 EKWRRLKQRK LQQWRPPLTS LLLDNQYLIL GLRIFTGILS CISLALAIKI FQNSRSNNTI 300
  301 SESKIGQQPS TIMAICVNAV AIAYIIYIAH DEFAGKPVGL RNPLSKLKLI LLDLLFIIFS 360
  361 SANLALAFNT RFDKEWVCTS IRRSNGSTYG YPKIPRICRK QEALSAFLFV ALFMWVITFS 420
  421 ISIVRVVEKV SSITNRN

Type	Start	End	Confidence
Non-Cytoplasmic	1	268	0.89
Transmembrane Helix	269	291	0.90
Cytoplasmic	292	308	0.85
Transmembrane Helix	309	329	0.92
Non-Cytoplasmic	330	348	0.82
Transmembrane Helix	349	368	0.94
Cytoplasmic	369	402	0.84
Transmembrane Helix	403	424	0.92
Non-Cytoplasmic	425	437	0.80