YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YDL094C
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVNISKQPT RSFSLDEVTV RNELKLSQGF VMRKDLKGPR LIVTSGMGST FSKCSLFIFK  60
   61 AVMILHTCLI VKSIRIFSKK KKRNGSMHNM YYASVPFLLF SNAYSIDFSR HVNEFLEKKR 120
  121 CEMIIPLKLL ADHTYLSEIE YVSLNADGQY SQLQDIFFIH DVFFVYFRF

Type	Start	End	Confidence
Non-Cytoplasmic	1	55	0.73
Transmembrane Helix	56	74	0.62
Cytoplasmic	75	87	0.64
Transmembrane Helix	88	106	0.50
Non-Cytoplasmic	107	169	0.72