YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NUR1
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSNDLINEA YDDSEVVGEE RESKSAWMKR WYQLLTSPLD LQLVINEKLE MINWDAYAKS  60
   61 LAKPLGNFLT ILFFIIRLLQ DNLIKPNYYK LNVKSGAFDL SKSNKLKEFD YLWEISSSFQ 120
  121 NNNQFYAFQS WYFVTLRFLN NLFRFTIFIL LSLNLYVSCK FMFGYFKTYN LFHLKKEFNS 180
  181 PNLTKHNLKD LSKEYYEDIY KQSLWSMLKH FFRGSRDDGP HVNQNEDEIF FQLRKWIPTN 240
  241 FMINLFVSFS PTAIVFLSFS DVSFTSAIAI VFHQYILDYI ITKRFQRSVD DDLILSSAAL 300
  301 QEYEDKHIMA RINQCSNIDT LSSAMGTRSK TPRIFTTHSL CGEEIREVYN YEKREFEALP 360
  361 KMTESVPGSR ETRIKDYGGI SQVSDHQSHP IGFHYSPRMS PYYRDKVLDN NLAQSSSNEN 420
  421 LEKGGAYLPN QDQNRPSKSL SPLRKTPLSA RQKRFEGSEF NVLNKNDINS ILRSPKKKKN 480
  481 YHKR

Type	Start	End	Confidence
Cytoplasmic	1	60	0.73
Transmembrane Helix	61	79	0.47
Non-Cytoplasmic	80	141	0.67
Transmembrane Helix	142	164	0.73
Cytoplasmic	165	239	0.70
Transmembrane Helix	240	259	0.72
Non-Cytoplasmic	260	484	0.65