YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|111116465, gi...
Protein type:	Transmembrane
Type Confidence:	0.62
Topology Confidence:	0.29
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAPQQSPEI GREILAAGYR TNLHDSGEGF PLMMIHGSGP GVTAWANWRL VMPELAKRRR  60
   61 VIAPDMLGFG YSERPADGQY HQQRWVEHAL GVLDALGIEQ ADLVGNSFGG GLALALAIRH 120
  121 PERVRRLVLM GSAGVSFPIT PGLDDVWGYE PSFATMRRLM DTFAYDRSLV TDELAELRYQ 180
  181 ASIRPGFQES FAQMFPAPRQ RWVDGLASDE ADIRALPHET LVIHGREDQV IPLAASLTLA 240
  241 EWIACAQLHV FGQCGHWTQI EHAERFARLV ENFLAEADAL HC

Type	Start	End	Confidence
Non-Cytoplasmic	1	31	0.86
Transmembrane Helix	32	51	0.49
Cytoplasmic	52	126	0.54
Transmembrane Helix	127	143	0.29
Non-Cytoplasmic	144	282	0.70