YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YET3
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLYYTLVFA ILVVEIFMFS ILALPIPSRY RRPLTLLLLK PFKSSTVQVA IKCVLGFILL  60
   61 LFIDCINRVY SIDKELQLSS ASQNNGAIIA QDRIEVLSRK FFAQRNMYLT GITLFLTFVV 120
  121 VRTFGLVIEL LTMKDIYRAS PPVASSDVKK NDSVTAEAAA QSGASKDDHG DEKNFELLKK 180
  181 IQDIDDEIAR LKEKSESLQE EIN

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.77
Transmembrane Helix	7	28	0.92
Cytoplasmic	29	47	0.79
Transmembrane Helix	48	66	0.81
Non-Cytoplasmic	67	106	0.75
Transmembrane Helix	107	128	0.84
Cytoplasmic	129	203	0.74