YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190405060
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIVLFLTLF CSVVFRTAYC DVAIVAPEPN SVYDLSGTSQ AVVKVKWMHT DNTPQEKDFV  60
   61 RYTFTLCSGT NAMIEAMATL QTLSASDLTD NEFNAIIENT VGTDGVYFIQ VFAQTAIGYT 120
  121 IHYTNRFKLK GMIGTKAANP SMITIAPEAQ TRITTGDVGA TIDSKSFTVP YNLQTGVVKY 180
  181 APMQLQPATK VTAKTWKRKY ATSEVTYYYT LRNSVDQHTT VTPGWSYIIT ADSNYATPAP 240
  241 MPADNGGWYN PRKRLSLTAR KVNALRHR

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	268	0.99