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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GPR1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITEGFPPNL NALKGSSLLE KRVDSLRQLN TTTVNQLLGL PGMTSTFTAP QLLQLRIIAI  60
   61 TASAVSLIAG CLGMFFLSKM DKRRKVFRHD LIAFLIICDF LKAFILMIYP MIILINNSVY 120
  121 ATPAFFNTLG WFTAFAIEGA DMAIMIFAIH FAILIFKPNW KWRNKRSGNM EGGLYKKRSY 180
  181 IWPITALVPA ILASLAFINY NKLNDDSDTT IILDNNNYNF PDSPRQGGYK PWSAWCYLPP 240
  241 KPYWYKIVLS WGPRYFIIIF IFAVYLSIYI FITSESKRIK AQIGDFNHNV LEEEKEKKKL 300
  301 FGLGHWGKAK WYFRSYFKLP LLHLLRNLKN FFTISFIDPN EETDDSGSSN GTFNFGESSN 360
  361 EIPTLFRKTN TGSDENVSAS GGVRLLDYNS AKPLDMSKYA MSEQPDLERN NPFDCENDIT 420
  421 LNPSELVSKQ KEHKVTFSVE NEGLDTRKSS MLGHQTFSCQ NSLESPLAMY DNKNDNSDIT 480
  481 SNIKEKGGII NNNSNNDDDD NNNNNDNDND NNNSNNNNNN NNNNNNNNNN NNNNNNNNNN 540
  541 NNNNSNNIKN NVDNNNTNPA DNIPTLSNEA FTPSQQFSQE RVNNNADRCE NSSFTNVQQH 600
  601 FQAQTYKQMK KRRAQIQKNL RAIFIYPLSY IGIWLFPIIA DALQYNHEIK HGPTMWVTYI 660
  661 DTCVRPLSCL VDVIVYLFKE KPWNYSWAKT ESKYLIEKYI LKGELGEKEI LKFCHSNWGK 720
  721 RGWYYRGKWK KRKCWKYSTN PLKRILWFVE RFFKQLFELK LHFSFYDNCD DFEYWENYYS 780
  781 AKDSNDNKRT ESDETKTNSS DRSLPSNSLE LQAMLNNITA EEVEVPLFWR IIHHIPMLGG 840
  841 IDLDELNRLL KIRYNNDHFS LPGLKFALNQ NKSHDKHQDV STNSMVKSSF FSSNIVTNDD 900
  901 ENSIEEDKNL RYSDASASEN YLVKPTIPGT TPDPIIEAQN DNDSSDSSGI DLIAFLRNGP 960
  961 L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle