YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ERP3
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.96
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNLCVLFFQ FFFLAQFFAE ASPLTFELNK GRKECLYTLT PEIDCTISYY FAVQQGESND  60
   61 FDVNYEIFAP DDKNKPIIER SGERQGEWSF IGQHKGEYAI CFYGGKAHDK IVDLDFKYNC 120
  121 ERQDDIRNER RKARKAQRNL RDSKTDPLQD SVENSIDTIE RQLHVLERNI QYYKSRNTRN 180
  181 HHTVCSTEHR IVMFSIYGIL LIIGMSCAQI AILEFIFRES RKHNV

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	192	0.99
Transmembrane Helix	193	217	0.84
Cytoplasmic	218	225	0.95