YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YDL011C
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADKLSSTDA MGCWSPTFCF ISLISSSTSE LPLFVVEVGI AAYSLEDPPA ILSILVLNAL  60
   61 EVSSFISTVK KFAFCATKNT NNNNSVVMLK ILAFLLLEGI IIKLFLY

Type	Start	End	Confidence
Cytoplasmic	1	11	0.86
Transmembrane Helix	12	34	0.74
Non-Cytoplasmic	35	49	0.74
Transmembrane Helix	50	69	0.78
Cytoplasmic	70	85	0.75
Transmembrane Helix	86	106	0.85
Non-Cytoplasmic	107	107	0.87