YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YCR087W
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIYLHIKFR LFLCIPDLPL RIHNQTFQEG LFCPFILHGF QNFVQRLALV KLDTVRGLFH  60
   61 FLCLLDHRLL HFLCRSCHWL VLVLLLLLLL LLLLLLLLVA LVQRFLVLLV LADARRVILV 120
  121 THAIFKRLGA IYACIVRVRT SIIMLFGILL GHSIITHLTV ERNHPVITNI S

Type	Start	End	Confidence
Cytoplasmic	1	76	0.87
Transmembrane Helix	77	100	0.89
Non-Cytoplasmic	101	104	0.60
Transmembrane Helix	105	125	0.55
Cytoplasmic	126	134	0.61
Transmembrane Helix	135	156	0.82
Non-Cytoplasmic	157	171	0.67