YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110800117, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRRKISALL LSCTLAMNIS SFNEIVLADE NKGEEVQKES HNESNCIAGD YHEVNNGNAK  60
   61 NTENTPVING IKVNKQLIDI NYSQGITINP KYIVIHDTDN RQAGANAMAN RNYFANHPNA 120
  121 KASVHYIIDE GNIIQALEDT WKGWHVGDGN NPNINNSTTI AIELCVNKGN DFDKTLENGI 180
  181 ELTKYLMNKY NIPAENVVMH RDASGKTCSR MMIEDRPSLW PYFKDRISGG DGSLEDDGLK 240
  241 PKMQGKVTNA SVLNVRESPS TSGRIVHKLN RNQVVGIYEE LNGWYKIDYI DGVKKKYGYV 300
  301 SKDYISIINE NPEDEETNGD IEIEKPSVSV NKKGIVKVNS ALNMRSGPGS NYGVIGTLRN 360
  361 NDEVEIIKEV DGWYEIKFNG KSGYVSSQYI KVVDNESNEE KPVEPEKPSV SVNKQGVVKV 420
  421 NSALNMRSGP GSNYGVIGTL RNNDKVEIIK EVDGWYEIRF NGKVGYASKS YITIVNEGSN 480
  481 NGTDSVIKEG TVYGVSTNLN VRTGPGTSYQ VIGYLLSGDK VKILEEENGW YKVQFNASTG 540
  541 TKNGYVSKDY IKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle