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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RRT12
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPQCILISL LVNLAYAEEY LVRFKNPTAF QQFTSNSNRS WRQFIDNKIE KKFSIGSFRG  60
   61 VTMNLSKNLV NKLKKSPLVA DIVPNFRFEA FEGDSVNSAE SSYTFNATAK YSYEDVEEEQ 120
  121 NITYQPDAPR HLARISRHYQ LPFDVGDKDR YKSWFNYYYE HDYQGQDVNA YIMDTGIFAD 180
  181 HPEFEDRVIQ GIDLTKEGFG DQNGHGTHVA GLVGSKTYGA AKRVNLVEVK VLGKDGSGEA 240
  241 SNVLSGLEFI VEHCTKVSRP QGKKCVANLS LGSFRSPIIN MAVEGAIEEG IVFVAAAGNF 300
  301 NLDAYWASPA SAENVITVGA FDDHIDTIAK FSNWGPCVNI FAPGVEIESL SHLNYNDTLI 360
  361 LSGTSMSTPI VTGVAAILLS KGIEPEMIAQ EIEYLSTRNV FHRRTLFFKP STPNQILYNG 420
  421 VDKLDDPYDD ETFPRLNIEA IAKELEEYNA TLQTPMSENL QSGSKLWGWN NDVTLPLGEI 480
  481 RLKRRDFMKN L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle