YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YCG5_YEAST
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKYVVTDIG KMCLYIWPYR VWSWRRLFIF RVLNVVSIAI LFETPHRLAL VPNVCLYTHM  60
   61 AIPLSTCLFC LCLCICIKYD ITQTQANNQR NLSLLFSVFH LVFSTIALSI YCIYQILILV 120
  121 KH

Type	Start	End	Confidence
Cytoplasmic	1	26	0.95
Transmembrane Helix	27	46	0.92
Non-Cytoplasmic	47	55	0.78
Transmembrane Helix	56	77	0.90
Cytoplasmic	78	95	0.79
Transmembrane Helix	96	118	0.91
Non-Cytoplasmic	119	122	0.90