YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FYV5
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQYHSALYVY IYVTFTTIPY KEKPDIISIC FSMLSFVFDF SVRICSRTLE SFSWSLISSS  60
   61 AFKVVSAFSL AGSCVLASRS SVGIIVSLLL FNFSTCNFVL FLSAVLIDLF FCTFLPTPTF 120
  121 LPTPFFFMLH LPIFSLLNAL ELLYLIIAGL HI

Type	Start	End	Confidence
Cytoplasmic	1	25	0.74
Transmembrane Helix	26	45	0.62
Non-Cytoplasmic	46	55	0.59
Transmembrane Helix	56	77	0.71
Cytoplasmic	78	87	0.48
Transmembrane Helix	88	112	0.79
Non-Cytoplasmic	113	125	0.64
Transmembrane Helix	126	148	0.90
Cytoplasmic	149	152	0.67