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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|182380510, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKIVIVGG VAGGASTAAR LRRLDENNQI IMFERGPHVS FSNCCLPYYL SGKVENHEDL  60
   61 VLMTPEKFYS QYRIDARVYT EVVSINRKAK EVTVRNVVSG QEYTESYDKL VLSPGAKAIV 120
  121 PPIKGIEDVN VFTVRNVVDI AKLDSFIKDN NSKNISVIGG GFIGVEVAEN LHEAGYNVTL 180
  181 IEAMDQIMKP FDYDMVQVLH KEMYDKGVNL IVGDKVSSFE SGKVVLESGK KINSDAVVMA 240
  241 IGVAPETDLA REAGLEIGQT GAIKVNQNYL TNDKDIYAVG DAVEVYNSLT NSISRLPLAG 300
  301 PAQKQARAVA DHIHGRPSRN SGYIGSSCVQ IFDYNGASTG LTEGQIKAMN LSLNYDVVRV 360
  361 IPQDKVGLMP GSEPLHFKLI FEVPTGRILG AQAIGKGNAD KRVDIIATLI KMGGTVEDLK 420
  421 DLELCYAPPF GTAKDVVNHA ALVASNLLEG TFKQVYVHEV RDLVESGACI IDVREVSEYE 480
  481 AGHIKGAKNL PLSEIRDRLD EIPTDRPVYL HCRSAQRSYN ACLALQHLGF DNIYNVSGGF 540
  541 MGISFYEYYN DKVQDREPIV TEYNFN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle