YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YCL022C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIILVMLNTR FFNPYCFQPS SSLCRPSYSL FSGILACISS SKILPFENFF KSTLLGGFFT  60
   61 VVGAFTVSLS FLSLSSFKSS SDREAAIFSL SVPFSAPSSM FSPTLLLLLV RLGKVTLEGS 120
  121 LWYRPNPLAF FPWKELKDGS FTTSVGSALF DIGDWFGFLS FMSYSCDMPT P

Type	Start	End	Confidence
Cytoplasmic	1	26	0.72
Transmembrane Helix	27	46	0.65
Non-Cytoplasmic	47	52	0.58
Transmembrane Helix	53	75	0.90
Cytoplasmic	76	85	0.57
Transmembrane Helix	86	110	0.75
Non-Cytoplasmic	111	140	0.56
Transmembrane Helix	141	159	0.49
Cytoplasmic	160	171	0.47