YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YCL007C
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELAKERNGP HQKHHGQCQN HCTSPNTVRQ NKTNKLLLVK KKGKLVIWRH IVKKMLHIRL  60
   61 VVLWSHYPEQ HGHGTNHYEY TNNSIAKLDA QRVSRRRRKK REAERRDYDT YKLLITLCSL 120
  121 LFVGPLFLKV

Type	Start	End	Confidence
Cytoplasmic	1	107	0.89
Transmembrane Helix	108	128	0.84
Non-Cytoplasmic	129	130	0.91