YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YCL002C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMVLRQLYYY RSTKHIYQGI SITSIIIISV FLVLGIFTYG CSISNLPLKN SGKFGVFYLE  60
   61 HINYLWVMAN LLKCFKYVPQ MSINWMGCST VGLSSKFALI SFLAESIDLL GRLVIPTNAL 120
  121 FYEIPFNSTP FWVKLIQFVT YWSYFVKFSM FT

Type	Start	End	Confidence
Cytoplasmic	1	18	0.86
Transmembrane Helix	19	40	0.92
Non-Cytoplasmic	41	56	0.81
Transmembrane Helix	57	75	0.59
Cytoplasmic	76	82	0.56
Transmembrane Helix	83	104	0.62
Non-Cytoplasmic	105	129	0.60
Transmembrane Helix	130	146	0.57
Cytoplasmic	147	152	0.52