YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CTP1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKATKSDV DPLHSFLAGS LAGAAEACIT YPFEFAKTRL QLIDKASKAS RNPLVLIYKT  60
   61 AKTQGIGSIY VGCPAFIIGN TAKAGIRFLG FDTIKDMLRD SETGELSGTR GVIAGLGAGL 120
  121 LESVAAVTPF EAIKTALIDD KQSATPKYHN NGRGVVRNYS SLVRDKGFSG LYRGVLPVSM 180
  181 RQAANQAVRL GCYNKIKTLI QDYTDSPKDK PLSSGLTFLV GAFSGIVTVY STMPLDTVKT 240
  241 RMQSLDSTKY SSTMNCFATI FKEEGLKTFW KGATPRLGRL VLSGGIVFTI YEKVLVMLA

Type	Start	End	Confidence
Signal Peptide	1	27	0.81
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	299	0.81