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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SHM1
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILSVICWFL VHCLFCPPSV QEIEYKKDSL FFFRYFAYWW SMRKKILKAI ASWRRANYQK  60
   61 SSSRHFHIES HSLSIMFPRA SALAKCMATV HRRGLLTSGA QSLVSKPVSE GDPEMFDILQ 120
  121 QERHRQKHSI TLIPSENFTS KAVMDLLGSE LQNKYSEGYP GERYYGGNEI IDKSESLCQA 180
  181 RALELYGLDP AKWGVNVQPL SGAPANLYVY SAIMNVGERL MGLDLPDGGH LSHGYQLKSG 240
  241 TPISFISKYF QSMPYHVDHT TGLIDYDNLQ VLAKAFRPKV IVAGTSAYSR LIDYARFKEI 300
  301 SQGCGAYLMS DMAHISGLVA ANVVPSPFEH SDIVTTTTHK SLRGPRGAMI FFRKGIKSVT 360
  361 KKGKEIPYEL EKKINFSVFP GHQGGPHNHT IGAMAVALKQ AMSPEFKEYQ QKIVDNSKWF 420
  421 AQELTKMGYK LVSGGTDNHL IVIDLSGTQV DGARVETILS ALNIAANKNT IPGDKSALFP 480
  481 SGLRIGTPAM TTRGFGREEF SQVAKYIDSA VKLAENLKTL EPTTKLDARS RLNEFKKLCN 540
  541 ESSEVAALSG EISKWVGQYP VPGDI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle