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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110683762, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLQSMITY IAIFAVVLMF AFAFYRNGTQ GKVISYTEFK EAYVGNKIET MTIKEDKMSV  60
   61 DGVFKDGKRF TSYVSNNMLD NLLQETKGVE TVIKYTPPNN MGIWISFLPT ILIIGVIFFG 120
  121 LFMFTQQAQN SGGNRGVMNF GKSKAKMANL DGKKVTFKDV AGADEEKGEL EEIVDFLKQP 180
  181 KRYIEMGARI PKGVLLVGPP GTGKTLLAKA IAGEAGVPFF SISGSDFVEM FVGVGASRVR 240
  241 DLFEQAKKNA PCIIFIDEID AVGRQRGAGL GGGHDEREQT LNQLLVEMDG FGVNEGIIMI 300
  301 AATNRPDILD PALLRPGRFD RRILVGAPDV KGREEVLKVH TRNKHLSEDV DLKVLAKMTP 360
  361 GFSGADLENL TNEAALLAVR GGKSSIDMSD IEEAITRVIA GPEKKSRVVS EYDRRITAVH 420
  421 ESGHAVVSNV LEYADPVHEI SIIQRGMAAG YTMNLPEEDR THTSKKQLKD KMVELLGGRV 480
  481 AEKLVIGDIS AGAKNDIDRA SHIARSMVME YGMSDVIGPI SFGNSDGGEV FLGRDIGKSS 540
  541 NISEETSAKI DEEIKKLIDE AYNRAESILR ENISKLNAVT DVLLQKEKID GDEFREIFKN 600
  601 S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle