YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ERV15
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGTGLSLFV TGLILNCLNS ICQIYFTILY GDLEADYINS IELCKRVNRL SVPEAILQAF  60
   61 ISALFLFNGY WFVFLLNVPV LAYNASKVYK KTHLLDATDI FRKLGRCKIE CFLKLGFYLL 120
  121 IFFFYFYRMV TALLENDANL IS

Type	Start	End	Confidence
Cytoplasmic	1	7	0.83
Transmembrane Helix	8	29	0.88
Non-Cytoplasmic	30	58	0.92
Transmembrane Helix	59	81	0.83
Cytoplasmic	82	110	0.89
Transmembrane Helix	111	130	0.90
Non-Cytoplasmic	131	142	0.87