YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DER1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAVILNLLG DIPLVTRLWT IGCLVLSGLT SLRIVDPGKV VYSYDLVFKK GQYGRLLYSI  60
   61 FDYGAFNWIS MINIFVSANH LSTLENSFNL RRKFCWIIFL LLVILVKMTS IEQPAASLGV 120
  121 LLHENLVYYE LKKNGNQMNV RFFGAIDVSP SIFPIYMNAV MYFVYKRSWL EIAMNFMPGH 180
  181 VIYYMDDIIG KIYGIDLCKS PYDWFRNTET P

Type	Start	End	Confidence
Cytoplasmic	1	14	0.87
Transmembrane Helix	15	35	0.87
Non-Cytoplasmic	36	62	0.86
Transmembrane Helix	63	83	0.84
Cytoplasmic	84	93	0.87
Transmembrane Helix	94	111	0.95
Non-Cytoplasmic	112	143	0.90
Transmembrane Helix	144	165	0.83
Cytoplasmic	166	211	0.90