YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110801642, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLLFLLIG IVILSILIFG CSSKKIETKK DSNKVIIGMD ETFVPMGFKN ENGDIVGFDV  60
   61 DLAKEAFKRM NLKVIFQPID WSMKETELTN GNIDLIWNGY TMTPEREKKV AFTNSYLKNR 120
  121 QVIVTLSNSN INTLKDLKGK TVTTQDGSSS LDTLFENPEL TKSFKNGEPV LFDSFNDCFM 180
  181 DLEAGRSDAV VCDEILAQYY IFKNDPSKFH VLTEDLGEES YSIGLRKNSN LIDPLNKTLE 240
  241 DMKEDGTIAK ISNKWFGKDL EK

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	262	0.99