YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NNRE_PIG
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGLRALLGL GLPVAGSRLP RVRVQAGACR ARPTWWGPQR LISGGRGDVE GMASSAVKYL  60
   61 SQEEAQAVDQ ELFNEYQFSV DQLMELAGLS CATAIAKVYP PTSLSRSPPT VLVICGPGNN 120
  121 GGDGLVCARH LKLFGYHPTI YYPKRPNKPL FTALVTQCQK MDIPFLDEMP SEPTLIDELY 180
  181 ELVVDAIFGF SFKGEVREPF RSILSVLNGL TVPIASIDIP SGWDVERGNS GGIQPDLLIS 240
  241 LTAPKKSAAQ FTGRYHYLGG RFVPPALEKK YQLNLPPYPD TECVYRLQ

Type	Start	End	Confidence
Signal Peptide	1	26	0.83
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	288	0.99