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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ECM33
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFKNALTAT AILSASALAA NSTTSIPSSC SIGTSATATA QADLDKISGC STIVGNLTIT  60
   61 GDLGSAALAS IQEIDGSLTI FNSSSLSSFS ADSIKKITGD LNMQELIILT SASFGSLQEV 120
  121 DSINMVTLPA ISTFSTDLQN ANNIIVSDTT LESVEGFSTL KKVNVFNINN NRYLNSFQSS 180
  181 LESVSDSLQF SSNGDNTTLA FDNLVWANNI TLRDVNSISF GSLQTVNASL GFINNTLPSL 240
  241 NLTQLSKVGQ SLSIVSNDEL SKAAFSNLTT VGGGFIIANN TQLKVIDGFN KVQTVGGAIE 300
  301 VTGNFSTLDL SSLKSVRGGA NFDSSSSNFS CNALKKLQSN GAIQGDSFVC KNGATSTSVK 360
  361 LSSTSTESSK SSATSSASSS GDASNAQANV SASASSSSSS SKKSKGAAPE LVPATSFMGV 420
  421 VAAVGVAYYK IKATICVSII TLISSLMISL PFLFYYETVG SSLNFICR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle