YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TIP1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVSKIAFVL SAIASLAVAD TSAAETAELQ AIIGDINSHL SDYLGLETGN SGFQIPSDVL  60
   61 SVYQQVMTYT DDAYTTLFSE LDFDAITKTI VKLPWYTTRL SSEIAAALAS VSPASSEAAS 120
  121 SSEAASSSKA ASSSEATSSA APSSSAAPSS SAAPSSSAES SSKAVSSSVA PTTSSVSTST 180
  181 VETASNAGQR VNAGAASFGA VVAGAAALLL

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	210	0.99