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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|213625887, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAAWRVFFL LCVHLQLAYV FSMSPAHAHA EERLLQSLFI NYNKLSRPVA NISDVVLVHF  60
   61 GLSIAQLIDV DEKNQMMTTN VWVKQEWNDY KLRWNPEEYE NVTSIRIPSE IIWRPDIVLY 120
  121 NNADGDFAVT HLTKAQVFYN GRIKWKPPAI YKSSCSIDVT FFPFDQQNCK MKFGSWTYDR 180
  181 AKIDLISMAS DVDQMDYWES GEWVIINAVG TYNIKKYECC TEIYPDITYS FIIRRLPLFY 240
  241 TINLIIPCLL ISCLTVLVFY LPSECAEKIT LCISVLLSLT VFLLLITEII PSTSLVIPLI 300
  301 GEYLLFTMIF VTLSIIITVF VLNVHHRSSR THSMPHWVRQ LFLHLVPRYL FMKRPPASGK 360
  361 RNCGKLIEMM HKQANSQSMF LRNNILDISP QSPIPHLGPT SAAQQDQVQQ DSTSPKPLFF 420
  421 CSSPSSQYSI LQEENSQTPQ TPVLSYTCAY TNSIFASSTT SFPDTLLGTL LHTIPQDGAK 480
  481 STECDFQGHS AESVFMEAKE SVLGAGSCQH CLTSEGTSLQ KLDLDEAGRC TRHNMPSAQI 540
  541 FSPSSDGSTD LNAAEPVSNL SQSLLKALEG VQYIADHLRA EDSDFSVRED WKYVAMVIDR 600
  601 IFLWMFVLVC ILGTVGLFLP PWLAGMI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle