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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRK13_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQRSLLSIL CFILLASGVA SVSAQTCIEN RKYFTPNGTY DSNRRLILSS LPNNTASRDG  60
   61 FYYGSIGEEQ DRVYALGMCI PKSTPSDCSN CIKGAAGWLI QDCVNQTDAY YWALDPTLCL 120
  121 VRYSNISFSG SAAFWEIEPQ YLVLNTATIA SNLTEFKTIW EDLTSRTITA ASAARSTPSS 180
  181 SDNHYRVDFA NLTKFQNIYA LMQCTPDISS DECNNCLQRG VLEYQSCCGN NTGGYVMRPI 240
  241 CFFRWQLFTF SKAFHNITLA TTPPLSPPPL QRPVVASQPP SADNRDKKRD NSSGKISMKT 300
  301 ILAIVVVGIV ILIIISGILA RRFARKEKPY QEVELNQTGI TSVRSLQYKF KTIETATNNF 360
  361 SERLGHGGSG HVFKGRLPDG KEIAVKRLSE KTEQSKKEFK NEVVLVAKLQ HRNLVRLLGF 420
  421 SVKGEEKIIV YEYLPNRSLD YILFDPTKQG ELDWKKRYKI IGGTARGILY LHQDSQPTII 480
  481 HRDLKAGNIL LDAHMNPKVA DFGTARIFGM DQSVAITANA AGTPGYMAPE YMELGEFSMK 540
  541 SDVYSYGVLV LEIICGKRNT SFSSPVQNFV TYVWRLWKSG TPLNLVDATI AENYKSEEVI 600
  601 RCIHIALLCV QEEPTDRPDF SIIMSMLTSN SLILPVPKPP PSFIPGRPNQ STTRPSSQNI 660
  661 NDGRWSLLKM MFH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle