YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GPI18
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVGLTLYFV LFRSIQYLLV FLTPIRQFDT STSLLLNELC SSPSEINSYW NKYFWNKLLS  60
   61 WDSVFFIKNI TSKNGKPQFE HEYAFSQLWT FFVRLFIKSN NDSIYHALRV GVAIENVLFY 120
  121 LSGIVLYFLT KKIFSQNIRQ SQFARTIAKK TSLLFFLTSA AGFLTSIYSE PLSFFFAFVG 180
  181 IWSRECTISV PVLGQFDISW RYWFPYSFIS MACFTLASLN RSNCVLLGIY FIFDLIELTK 240
  241 NRKFVKAICF PLLSGSLMFS ALLYQQYYLP YKTFCPQRGE WCKSQLFSSI FITKTSLYSY 300
  301 IQSHYWGVGL LKYWTPNNIP NFLFAVPNII ILIYSSIYFS KIYPSYNLKA LVWITRALVV 360
  361 IVCFFAHVQI LNRIASFLPL HLWYLADRLV KTSDPKKMEN PKGDDKIVKF YIYWLAFWIP 420
  421 LQTILFAAFL PPA

Type	Start	End	Confidence
Cytoplasmic	1	8	0.63
Transmembrane Helix	9	25	0.58
Non-Cytoplasmic	26	109	0.74
Transmembrane Helix	110	130	0.81
Cytoplasmic	131	150	0.91
Transmembrane Helix	151	172	0.89
Non-Cytoplasmic	173	205	0.89
Transmembrane Helix	206	233	0.77
Cytoplasmic	234	243	0.93
Transmembrane Helix	244	264	0.92
Non-Cytoplasmic	265	318	0.87
Transmembrane Helix	319	340	0.87
Cytoplasmic	341	351	0.69
Transmembrane Helix	352	371	0.93
Non-Cytoplasmic	372	409	0.71
Transmembrane Helix	410	430	0.92
Cytoplasmic	431	433	0.57