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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: unc-83
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGRVTVDSC TSSSEDQMVE QSTNKKWESV LQDVGYSSGE NSIHEALNTC ADHLVPETSD  60
   61 MRRKRIECSP VKAFYRTVQL EDMSDLEVTK AINHDVEEEP NLSDSMYVNH DSTFLATQNL 120
  121 PEYDEVMALM DDDDLPMDMS MTESFNTKWR EIHGQKKPLR RASRPSREQM NLIAKSSCDA 180
  181 SSEDSSEGEN QTNLEDDPEM MSVSFNSAQF DTSSPLKRQR SARGLKNASF LYDSLEMDGS 240
  241 FCSTRSEMLP PCKTRSLARR KLRVRRMPRS MSDGEQLGVV SSKPEGMMTP MIRVSPPSTP 300
  301 VRRLLRKLDE QIRNRDSDTA PEHSDAAQAY EWDEYNPPQK DDSISDRHIQ TMTDISDQLM 360
  361 NIDDDFAEHF GTSSAIRLIE ESKSHLRVVL KALEESDSNI PQLSNFELIA RSNLRQVDEA 420
  421 LKIQSGNQPS FLETSTLQDL RSEWANLYES IRSPFARIMH QVKKFAATLQ EVSSMASLGD 480
  481 VDIRSKEDVA KTLDAVTAIE RRLSSERQEL RDLLASSSFR DVAKDLSCEF ESVSEGYDDA 540
  541 VDKIGKMAHS LSQVKGEWDA WNSRQNDIRN AMVRIESHLK EGQMDNKMIA DEMELCQERM 600
  601 NSLETMCNYL TASLGSIQNE SNSKNLPDFK AELSIYSNAL ARLKDRFNDM IRVPTPPTVQ 660
  661 FHPPEPLPSL ARSMTTQTAE MESETENEPL TIAEAISSSR LIKFTFALSL LAALAAIFYY 720
  721 HVFGKPFGPH VTYVNGPPPV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle