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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: unc-83
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSTLEKSAK KILAERPEAE NSVLLRLNTI CCAMDQLRVQ HNSRMMSGAD SDTASSARSS  60
   61 TSSSTGEMRL WLHEVERRLE INEKRIRVEP NLQLLLSDQQ ALQLEIQHEG QLLVNRLNKQ 120
  121 IKDDHDSDSS EEEKRKTCVD AIRKRWHTIY LNSLSLVCRI EELINHQQAS EDSESDPDLV 180
  181 GPPIKRARIR TVGHLTASDT EESEADEEDR HSQTETVVTE DDNVLPFAEN EYESIMDGRV 240
  241 TVDSCTSSSE DQMVEQSTNK KWESVLQDVG YSSGENSIHE ALNTCADHLV PETSDMRRKR 300
  301 IECSPVKAFY RTVQLEDMSD LEVTKAINHD VEEEPNLSDS MYVNHDSTFL ATQNLPEYDE 360
  361 VMALMDDDDL PMDMSMTESF NTKWREIHGQ KKPLRRASRP SREQMNLIAK SSCDASSEDS 420
  421 SEGENQTNLE DDPEMMSVSF NSAQFDTSSP LKRQRSARGL KNASFLYDSL EMDGSFCSTR 480
  481 SEMLPPCKTR SLARRKLRVR RMPRSMSDGE QLGVVSSKPE GMMTPMIRVS PPSTPVRRLL 540
  541 RKLDEQIRNR DSDTAPEHSD AAQAYEWDEY NPPQKDDSIS DRHIQTMTDI SDQLMNIDDD 600
  601 FAEHFGTSSA IRLIEESKSH LRVVLKALEE SDSNIPQLSN FELIARSNLR QVDEALKIQS 660
  661 GNQPSFLETS TLQDLRSEWA NLYESIRSPF ARIMHQVKKF AATLQEVSSM ASLGDVDIRS 720
  721 KEDVAKTLDA VTAIERRLSS ERQELRDLLA SSSFRDVAKD LSCEFESVSE GYDDAVDKIG 780
  781 KMAHSLSQVK GEWDAWNSRQ NDIRNAMVRI ESHLKEGQMD NKMIADEMEL CQERMNSLET 840
  841 MCNYLTASLG SIQNESNSKN LPDFKAELSI YSNALARLKD RFNDMIRVPT PPTVQFHPPE 900
  901 PLPSLARSMT TQTAEMESET ENEPLTIAEA ISSSRLIKFT FALSLLAALA AIFYYHVFGK 960
  961 PFGPHVTYVN GPPPV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle