YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|207347935
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEEPPSDQV NSLRDSLNRW NQTRQQNSQG FNESAKTLFS SWADSLNTRA QDIYQTLPVS  60
   61 RQDLVQDQEP SWFQLSRTER MVLFVCFLLG ATACFTLCTF LFPVLAAKPR KFGLLWTMGS 120
  121 LLFVLAFGVL MGPLAYLKHL TARERLPFSM FFFATCFMTI YFAAFSKNTV LTITCALLEL 180
  181 VAVIYYAISY FPFGATGLRM LSSAGVNSAR GVLRI

Type	Start	End	Confidence
Cytoplasmic	1	81	0.97
Transmembrane Helix	82	105	0.94
Non-Cytoplasmic	106	113	0.81
Transmembrane Helix	114	137	0.91
Cytoplasmic	138	145	0.91
Transmembrane Helix	146	165	0.94
Non-Cytoplasmic	166	172	0.74
Transmembrane Helix	173	194	0.80
Cytoplasmic	195	215	0.81