YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|151946305
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRTIPFLFK LVNRAVILPT AGFTLGVGAF VKAWPDDAGV LSLNDPQTPA ELISATKSRQ  60
   61 PMELQRVDIL AQIEKSEVYN KLAQDEKMHH VLFSEKIPSG HREYHVGQGL LFGKGKLEID 120
  121 PLVFHDVNHG ELTVIYHLGA ELGNRDGNVH KGLLSLLLDE ALCYCGFPLL PSKRGVTARL 180
  181 SLEFFEDIPV DTTIILKANV KEIKGRKCII EGHLEQFPLE VSSRNGTRSW NLPHIWGFNH 240
  241 KQEMAKKFAK ANCILVEPTW FKYFKWLDMF

Type	Start	End	Confidence
Signal Peptide	1	33	0.82
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	270	0.99