YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RRT1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILFKNLVFL PSILIGYISI RVSLLVWVNW VLVWSSCFQV AFIFSLWYFI LSIYTFFYSK  60
   61 KIKQIISYEP SYFVFSYRAI DLCPERVLLY FFCIFNNVVF PML

Type	Start	End	Confidence
Cytoplasmic	1	6	0.95
Transmembrane Helix	7	28	0.90
Non-Cytoplasmic	29	36	0.67
Transmembrane Helix	37	58	0.91
Cytoplasmic	59	103	0.86