YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FUN14
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLAFNMQRL VFRNLNVGKR MFKNVPLWRF NVANKLGKPL TRSVGLGGAG IVAGGFYLMN  60
   61 RQPSKLIFND SLGAAVKQQG PLEPTVGNST AITEERRNKI SSHKQMFLGS LFGVVLGVTV 120
  121 AKISILFMYV GITSMLLCEW LRYKGWIRIN LKNIKSVIVL KDVDLKKLLI DGLLGTEYMG 180
  181 FKVFFTLSFV LASLNANK

Type	Start	End	Confidence
Cytoplasmic	1	105	0.60
Transmembrane Helix	106	132	0.78
Non-Cytoplasmic	133	177	0.56
Transmembrane Helix	178	196	0.58
Cytoplasmic	197	198	0.70