YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110672113
Protein type:	Transmembrane
Type Confidence:	0.68
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKTQITELG DALYQALTTR TVLDPLTERH PDMTIEDAYH IQQRMIERRV QAGETIIGKK  60
   61 IGVTSAAVMN MLGVYQPDFG YMLDGMIYNE GQSIEIGTLI QPKAEGEIAF ILKKDLMGPG 120
  121 VTNVDVLAAT ECVMPCFEIV DSRIRDWKIK IQDTVADNAS CGVFVLGDHA VDPRKLDLTL 180
  181 CGMVMERNGE IIATGCGAAA LGSPVNAVAW LANTLGRLGI ALKAGEVILS GALAAMFPAK 240
  241 AGDSFRVSIG GLGGCSVRFH

Type	Start	End	Confidence
Cytoplasmic	1	190	0.55
Transmembrane Helix	191	212	0.57
Non-Cytoplasmic	213	219	0.73
Transmembrane Helix	220	239	0.53
Cytoplasmic	240	260	0.45