YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATP6
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNLLNTYIT SPLDQFEIRT LFGLQSSFID LSCLNLTTFS LYTIIVLLVI TSLYTLTNNN  60
   61 NKIIGSRWLI SQEAIYDTIM NMTKGQIGGK NWGLYFPMIF TLFMFIFIAN LISMIPYSFA 120
  121 LSAHLVFIIS LSIVIWLGNT ILGLYKHGWV FFSLFVPAGT PLPLVPLLVI IETLSYFARA 180
  181 ISLGLRLGSN ILAGHLLMVI LAGLTFNFML INLFTLVFGF VPLAMILAIM MLEFAIGIIQ 240
  241 GYVWAILTAS YLKDAVYLH

Type	Start	End	Confidence
Cytoplasmic	1	32	0.76
Transmembrane Helix	33	56	0.81
Non-Cytoplasmic	57	91	0.79
Transmembrane Helix	92	114	0.88
Cytoplasmic	115	120	0.62
Transmembrane Helix	121	143	0.87
Non-Cytoplasmic	144	150	0.61
Transmembrane Helix	151	176	0.77
Cytoplasmic	177	190	0.61
Transmembrane Helix	191	211	0.88
Non-Cytoplasmic	212	219	0.47
Transmembrane Helix	220	244	0.82
Cytoplasmic	245	259	0.70