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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AI1
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.30
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQRWLYSTN AKDIAVLYFM LAIFSGMAGT AMSLIIRLEL AAPGSQYLHG NSQLFNGAPT  60
   61 SAYISLMRTA LVLWIINRYL KHMTNSVGAN FTGTMACHKT PMISVGGVKC YMVRLTNFLQ 120
  121 VFIRITISSY HLDMVKQVWL FYVEVIRLWF IVLDSTGSVK KMKDTNNTKG NTKSEGSTER 180
  181 GNSGVDRGMV VPNTQMKMRF LNQVRYYSVN NNLKMGKDTN IELSKDTSTS DLLEFEKLVM 240
  241 DNMNEENMNN NLLSIMKNVD MLMLAYNRIK SKPGNMTPGT TLETLDGMNM MYLNKLSNEL 300
  301 GTGKFKFKPM RMVNIPKPKG GMRPLSVGNP RDKIVQEVMR MILDTIFDKK MSTHSHGFRK 360
  361 NMSCQTAIWE VRNMFGGSNW FIEVDLKKCF DTISHDLIIK ELKRYISDKG FIDLVYKLLR 420
  421 AGYIDEKGTY HKPMLGLPQG SLISPILCNI VMTLVDNWLE DYINLYNKGK VKKQHPTYKK 480
  481 LSRMIAKAKM FSTRLKLHKE RAKGPTFIYN DPNFKRMKYV RYADDILIGV LGSKNDCKMI 540
  541 KRDLNNFLNS LGLTMNEEKT LITCATETPA RFLGYNISIT PLKRMPTVTK TIRGKTIRSR 600
  601 NTTRPIINAP IRDIINKLAT NGYCKHNKNG RMGVPTRVGR WTYEEPRTII NNYKALGRGI 660
  661 LNYYKLATNY KRLRERIYYV LYYSCVLTLA SKYRLKTMSK TIKKFGYNLN IIENDKLIAN 720
  721 FPRNTFDNIK KIENHGMFMY MSEAKVTDPF EYIDSIKYML PTAKANFNKP CSICNSTIDV 780
  781 EMHHVKQLHR GMLKATKDYI TGRMITMNRK QIPLCKQCHI KTHKNKFKNM GPGM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle