YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CYOE_ALCBS
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	11	0.95
Transmembrane Helix	12	33	0.91
Non-Cytoplasmic	34	42	0.77
Transmembrane Helix	43	66	0.91
Cytoplasmic	67	86	0.94
Transmembrane Helix	87	108	0.93
Non-Cytoplasmic	109	113	0.78
Transmembrane Helix	114	134	0.92
Cytoplasmic	135	140	0.92
Transmembrane Helix	141	160	0.95
Non-Cytoplasmic	161	166	0.83
Transmembrane Helix	167	188	0.92
Cytoplasmic	189	213	0.90
Transmembrane Helix	214	231	0.94
Non-Cytoplasmic	232	236	0.78
Transmembrane Helix	237	255	0.95
Cytoplasmic	256	268	0.84
Transmembrane Helix	269	290	0.89
Non-Cytoplasmic	291	303	0.91

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSERTHWRDY LALTKPGVVM LLMVTAVAGM FLATEPAGMV PLATFIPAFV GLSLAMMASA  60
   61 AINQIMDQKI DAIMKRTEKR PLVAGKLTPK AAITFAVLLA TASMIMLYFL VNPLTAWLTL 120
  121 FGFVGYAFIY TLYLKRATPQ NIVIGGIAGA IPPLLGWTAV TGEAHPYAWL LVLIIFVWTP 180
  181 PHFWALAIHR RDEYAKADIP MLPVTHGIPF TRESVLYYTI LLFICTLLPY LTGMSDLIYL 240
  241 LSALILGLVF LYHAVRLRFS EDPKLPMKTF GYSITYLFAL FTALLVDHYL PVTPANVASW 300
  301 LGA