YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110646976, gi...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCKTKNKPLF FNVLHKLSSN CPLYAICLNS SGHIATWYST LLYRFPILNV SAPYLATVSA  60
   61 GGHISIPLSV KGKAFMKRQK RNKDDRAYNR GYNAGLDGKS REDCPFGTLQ ARTNWMGGWR 120
  121 EGRTDFAHGM LGVASIQNLK NIG

Type	Start	End	Confidence
Cytoplasmic	1	20	0.81
Transmembrane Helix	21	41	0.79
Non-Cytoplasmic	42	49	0.84
Transmembrane Helix	50	70	0.84
Cytoplasmic	71	143	0.89