YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110833693, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTVAVLAFD GVFASALTGV VDLLNLTGVT WNRIHGQPLS RQFKVHVVSR GGTPVRCTNG  60
   61 IRMAVDCSLE QIDQADLVVV PTIGGQIETV LSQEKDTLSW LRFLHQGGAD LASNCTGAFL 120
  121 LAEAGLLDGK TATTHWGFSQ EFRHRYPQVN LTERELITRH DNIFCAGGGT AWRDLTILLV 180
  181 ERFCGAEMAR ELARAFVIDV RNDLQSIYAG LPAHTYHQDD QVQAIQAWIH EHFKENTSLG 240
  241 ELAERACLSP RQLQRRFTTT LGEPPLQYLQ RVRIEAARKM LERGSNNLAK LAERVGYQDV 300
  301 SSFSRLFKRH TGLSPSHYRQ RFARTGALND

Type	Start	End	Confidence
Signal Peptide	1	16	0.67
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	330	0.94