YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110835721
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASASSGPAA AGFSPLDSGV PAGTAASGIK RGTVSEGPYA SLMPVKKIGH RSVDSSGETT  60
   61 YKKTTSSALK GAIQLGITHT VGSLSTKPER DVLMQDFYVV ESIFFPSEGS NLTPAHHYND 120
  121 FRFKTYAPVA FRYFRELFGI RPDDYLYSLC SEPLIELSNS GASGSLFYVS SDDEFIIKTV 180
  181 QHKEAEFLQK LLPGYYMNLN QNPRTLLPKF YGLYCVQAGG KNIRIVVMNN LLPRSVKMHM 240
  241 KYDLKGSTYK RRASQKEREK TLPTFKDLDF LQDIPDGLFL DADMYSALCK TLQRDCLVLQ 300
  301 SFKIMDYSLL MSIHNMDHAQ REPMNSETQY SVDTRRPAPQ KALYSTAMES IQGEARRGGT 360
  361 VETEDHMGGI PARNNKGERL LLYIGIIDIL QSYRFVKKLE HSWKALVHDG DTVSVHRPGF 420
  421 YAERFQRFMC NTVFKKIPLK PSPTKKFRSG PSFSRRSGPS GNSCTPSQPT ASGEHKAQVT 480
  481 TKAEVEPDIH LGRPDVLPQT PPLEEISEGS PVPGPSFSPA VGQPLQILNL SSTLEKLDVA 540
  541 ESELTH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle