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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110628931
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLPFLGRLN IPEYVALLGS FFLVGLEAFI RVITLALPST LISLLYGVSR RIFNRYSTPK  60
   61 QKIAVEKQKP VSTSIRDASD FVELCALNGY QAEEHVVQTK DGYLLGLHRL AWRKGEEDQR 120
  121 VNSGPNSVQK RVVYLHHGLL MNSEVWVCQT DTNRSLAFVL VDQGFDVWLG NNRGNKYSKK 180
  181 SINHSPASTA FWNFSIDEFA FHDIPDSIAY ILETTDEKSL SYIGFSQGTA QAFASLAVNP 240
  241 RLNQQVNVFI ALAPAMSPAG LSNRVVDALI KSSPSVLFLL FGRRAILSSA TMWETILYPP 300
  301 IFIKVIDVAV SFLFGWKTRN ISTSQKLAAY PHLYSFTSTK SVVHWFQIIR TKSFQMYDDD 360
  361 VQQPLSLSTS SRFTKVAKYP TRNIKTPIVL VYGGSDSLVD IKVMLRQLPP QTVATEIPRY 420
  421 EHIDFLWARD VDAQVFRHVF DALDSFTGAE HTKEEYNRYR TARSSSISAS VNFRRHAHHD 480
  481 SVDTQADVTD ETTATTTEAE SDSGDRTLVN GRGGSRSRLR HQATEGLRSP SRGSEVSVGP 540
  541 ASGGLNTNGT VASDGESSSG SPARRRAGIQ RHTSGVSVDS LRQGRGIRVG ASRAVGGVTA 600
  601 AIAGGNSPSS GTD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle