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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110807978, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYLNLRLYQ RNTQCLHIRK HRLAGFFVRL VVACAFAAQA PLSSADLYFN LRFLADDPQA  60
   61 VADLSRFENG QELPLGTYRV DIYLNNGYMA TRDVTFNTGD SEQGIVPCLT RAQLASMGLN 120
  121 TASVAGMNLL ADDACVPLTT MVQDATAHLD VGQQRLNLTI PQAFMSNRAR GYIPPELWDP 180
  181 GINAGLLNYN FSGNSVQNRI GGNSHYAYLN LQSGLNIGAW RLRDNTTWSY NSSDSSSGSK 240
  241 NKWQHIITWI ERDIIPLRSR LTLGDGYTQG DIFDGINFRG AQLASDDNML PDSQRGFAPV 300
  301 IHGIARGTAQ VTIKQNGYGI YNSTVPPGPF TINDIYAAGN SGDLQVTIKE ADGSTQIFTV 360
  361 PYSSVPLLQR EGHTRYSITA GEYRSGNAQQ EKPRFFQSTL LHGLPAGWTI YGGTQLADRY 420
  421 RAFNFGIGKN MEALGALSVD MTQANSTLPD DSQHDGQSVR FLYNKSLNES GTNIQLVGYR 480
  481 YSTSGYFNFA DTTYSRMNGY NIETQDGVIQ VKPKFTDYYN LAYNKRGKLQ LTVTQQLGRT 540
  541 STLYLSGSHQ TYWGTSNVDE QFQAGLNTAF EDINWTLSYS LTKNAWQKGR DQMLALNVNI 600
  601 PFSHWLRSDS KSQWRHASAS YSMSHDLNGR MTNLAGVYGT LLEDNNLSYS VQTGYAGGGD 660
  661 GNSGSTGYAT LNYRGGYGNA NIGYSHSDDI KQLYYGVSGG VLAHANGVTL GQPLNDTVVL 720
  721 VKAPGAKDAK VENQTGVRTD WRGYAMLPYA TEYRENRVAL DTNTLADNVD LDNAVANVVP 780
  781 TRGAIVRAEF KARVGIKLLM TLTHNNKPLP FGAMVTSESS QSSGIVADNG QVYLSGMPLA 840
  841 GKVQVKWGEE ENAHCVANYQ LPPESQQQLL TQLSAECR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle