YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110617414, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEISTLQIIA IFLFSCIAGM GSVLDEFQTH RPLIACTVIG LILGDLKTGI ILGGTLELIA  60
   61 LGWMNVGAAQ SPDSALASII STILVIVGQQ SIATGIAIAL PVAAAGQVLT VFARIITVVF 120
  121 QHAADKAAEE ARFRTLDILH VSALGVQALR VAIPALIVSL FVSADMVSNM LNAIPEFVTR 180
  181 GLQIAGGFIV VVGYAMVLRM MGVKYLMPFF FLGFLAGGYL DLSLLAFGGV GVIMALVYIQ 240
  241 LNPQWRKAEP QLQATASTAL DQLDD

Type	Start	End	Confidence
Cytoplasmic	1	5	0.48
Transmembrane Helix	6	24	0.91
Non-Cytoplasmic	25	32	0.38
Transmembrane Helix	33	67	0.62
Cytoplasmic	68	73	0.35
Transmembrane Helix	74	93	0.66
Non-Cytoplasmic	94	94	0.26
Transmembrane Helix	95	118	0.74
Cytoplasmic	119	137	0.48
Transmembrane Helix	138	164	0.72
Non-Cytoplasmic	165	178	0.46
Transmembrane Helix	179	203	0.81
Cytoplasmic	204	208	0.42
Transmembrane Helix	209	239	0.76
Non-Cytoplasmic	240	265	0.48