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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110617373, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKPAASFFY CGCFTMIKKA SLLTACSVTA FSAWAQDTSP DTLVVTAIRF EQPRSTVLAP  60
   61 TTVVTRQDID RWQSTSVNDV LRRLPGVDIT QNGGSGQLSS IFIRGTNASH VLVLIDGVRL 120
  121 NLAGVSGSAD LSQFPIALVQ RIEYIRGPRS AVYGSDAIGG VVNIITTRDE PGTEISAGWG 180
  181 SNSYQNYDVS TQQQLGDKTR VTLLGDYAHT HGYDVVAYGN TGTQAQTDND GFLSKTLYGA 240
  241 LEHNFTDAWS GFVRGYGYDN RTNYDAYYSP GSPLLDTRKL YSQSWDAGLR YNGELIKSQL 300
  301 ITSYSHSKDY NYDPHYGRYD SSATLDEMKQ YTVQWANNVI VGHGSIGAGV DWQKQTTTPG 360
  361 TGYVEDGYDQ RNTGIYLTGL QQVGDFTFEG AARSDDNSQF GRHGTWQTSA GWEFIEGYRF 420
  421 IASYGTSYKA PNLGQLYGFY GNPNLDPEKS KQWEGAFEGL TAGVNWRISG YRNDVSDLIY 480
  481 YDDHTLKYYN EGKARIKGVE ATANFDTGPL THTVSYDYVD ARNAITDTPL LRRAKQQVKY 540
  541 QLDWQLYDFD WGITYQYLGT RYDKDYSSYP YQTVKMGGVS LWDLAVAYPV TSHLTVRGKI 600
  601 ANLFDKDYET VYGYQTAGRE YTLSGSYTF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle